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  • Top cofit genes for DZA65_RS02290 from Dickeya dianthicola ME23

    SDR family oxidoreductase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS12685 hypothetical protein no 0.42
    2 DZA65_RS07360 glutathione S-transferase family protein no 0.40
    3 DZA65_RS03585 helix-turn-helix transcriptional regulator no 0.40
    4 DZA65_RS04105 phage tail protein no 0.39
    5 DZA65_RS02665 ROK family transcriptional regulator no 0.37
    6 DZA65_RS12800 ATP-dependent RNA helicase HrpA no 0.37
    7 DZA65_RS18735 excinuclease ABC subunit UvrA no 0.36
    8 DZA65_RS02480 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR no 0.36
    9 DZA65_RS19160 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no 0.36
    10 DZA65_RS08700 ABC transporter permease subunit no 0.36
    11 DZA65_RS16560 hypothetical protein no 0.36
    12 DZA65_RS16440 peptidase no 0.35
    13 DZA65_RS01765 2,5-didehydrogluconate reductase DkgA no 0.35
    14 DZA65_RS08580 DotU family type IV/VI secretion system protein no 0.35
    15 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit no 0.35
    16 DZA65_RS20710 polysaccharide lyase no 0.35
    17 DZA65_RS09235 5-oxoprolinase subunit PxpA no 0.34
    18 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD no 0.34
    19 DZA65_RS02965 glucuronate isomerase no 0.33
    20 DZA65_RS15925 TetR/AcrR family transcriptional regulator no 0.33

    Or look for negative cofitness