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  • Top cofit genes for DZA65_RS02270 from Dickeya dianthicola ME23

    sugar ABC transporter ATP-binding protein
    SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
    KEGG: ribose transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00380 amino acid adenylation domain-containing protein no 0.58
    2 DZA65_RS14195 SDR family NAD(P)-dependent oxidoreductase no 0.57
    3 DZA65_RS08850 RHS repeat protein no 0.55
    4 DZA65_RS09775 oxygen-insensitive NADPH nitroreductase no 0.55
    5 DZA65_RS10745 D-hexose-6-phosphate mutarotase no 0.50
    6 DZA65_RS05560 YaeQ family protein no 0.49
    7 DZA65_RS04305 cytosine permease no 0.49
    8 DZA65_RS21995 universal stress protein UspA no 0.49
    9 DZA65_RS13765 PepSY domain-containing protein 0.35 0.49
    10 DZA65_RS11755 alpha/beta hydrolase no 0.47
    11 DZA65_RS07285 galactonate dehydratase no 0.47
    12 DZA65_RS19955 nitrogen fixation protein NifW no 0.47
    13 DZA65_RS16155 NupC/NupG family nucleoside CNT transporter no 0.47
    14 DZA65_RS11770 osmotically-inducible lipoprotein OsmE 0.30 0.46
    15 DZA65_RS04300 LuxR family transcriptional regulator no 0.45
    16 DZA65_RS17060 sulfate ABC transporter ATP-binding protein no 0.45
    17 DZA65_RS20270 malate synthase A no 0.45
    18 DZA65_RS10720 GlsB/YeaQ/YmgE family stress response membrane protein no 0.44
    19 DZA65_RS11895 peptidase T no 0.44
    20 DZA65_RS13365 membrane integrity-associated transporter subunit PqiA no 0.44

    Or look for negative cofitness