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  • Top cofit genes for DZA65_RS02255 from Dickeya dianthicola ME23

    D-threitol dehydrogenase
    SEED: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS05375 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.50 0.44
    2 DZA65_RS17760 S-methyl-5-thioribose kinase no 0.41
    3 DZA65_RS09270 hypothetical protein no 0.41
    4 DZA65_RS14855 hydrogenase expression/formation protein HypE 0.41 0.40
    5 DZA65_RS22325 response regulator no 0.40
    6 DZA65_RS17815 amino acid ABC transporter permease 0.27 0.40
    7 DZA65_RS21805 MFS transporter 0.62 0.40
    8 DZA65_RS15070 tail sheath protein no 0.39
    9 DZA65_RS17230 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI no 0.38
    10 DZA65_RS05760 methionine synthase 0.47 0.37
    11 DZA65_RS04855 helix-turn-helix domain-containing protein no 0.36
    12 DZA65_RS10790 DUF1496 domain-containing protein 0.52 0.36
    13 DZA65_RS20870 DNA utilization protein GntX no 0.35
    14 DZA65_RS10320 molecular chaperone no 0.35
    15 DZA65_RS19050 protein transport protein HofC no 0.35
    16 DZA65_RS04120 DUF2597 family protein no 0.35
    17 DZA65_RS10970 PHP domain-containing protein no 0.35
    18 DZA65_RS09495 YecH family protein no 0.34
    19 DZA65_RS15565 hypothetical protein no 0.34
    20 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD 0.29 0.34

    Or look for negative cofitness