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  • Top cofit genes for DZA65_RS02090 from Dickeya dianthicola ME23

    TIGR04141 family sporadically distributed protein
    SEED: FIG00508541: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15025 DUF2313 domain-containing protein no 0.48
    2 DZA65_RS04645 glycoside hydrolase family 5 protein no 0.46
    3 DZA65_RS02015 alpha/beta fold hydrolase no 0.43
    4 DZA65_RS02115 AlpA family transcriptional regulator no 0.42
    5 DZA65_RS17030 hypothetical protein no 0.42
    6 DZA65_RS18100 hypothetical protein no 0.42
    7 DZA65_RS02380 IclR family transcriptional regulator no 0.42
    8 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.41
    9 DZA65_RS10375 hypothetical protein no 0.41
    10 DZA65_RS18845 ATP-binding protein no 0.41
    11 DZA65_RS01925 proteasome-type protease no 0.40
    12 DZA65_RS20335 DNA-protecting protein DprA no 0.40
    13 DZA65_RS17325 polyphenol oxidase no 0.40
    14 DZA65_RS03210 preprotein translocase subunit SecG no 0.39
    15 DZA65_RS03140 putative DNA-binding transcriptional regulator 0.29 0.39
    16 DZA65_RS15250 hypothetical protein no 0.39
    17 DZA65_RS03755 helix-turn-helix transcriptional regulator no 0.39
    18 DZA65_RS11105 SgcJ/EcaC family oxidoreductase no 0.39
    19 DZA65_RS19920 nif-specific transcriptional activator NifA no 0.38
    20 DZA65_RS14400 type IV secretion system protein no 0.38

    Or look for negative cofitness