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  • Top cofit genes for DZA65_RS01945 from Dickeya dianthicola ME23

    FAD-dependent oxidoreductase
    SEED: Tryptophan 2-monooxygenase (EC 1.13.12.3)
    KEGG: tryptophan 2-monooxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS11105 SgcJ/EcaC family oxidoreductase no 0.62
    2 DZA65_RS14290 UvrY/SirA/GacA family response regulator transcription factor no 0.57
    3 DZA65_RS00430 histidine kinase no 0.56
    4 DZA65_RS00410 helix-turn-helix transcriptional regulator no 0.56
    5 DZA65_RS20785 PilN domain-containing protein no 0.54
    6 DZA65_RS00755 JAB domain-containing protein no 0.53
    7 DZA65_RS04780 hypothetical protein no 0.51
    8 DZA65_RS00320 xylose ABC transporter ATP-binding protein no 0.51
    9 DZA65_RS14400 type IV secretion system protein no 0.50
    10 DZA65_RS18155 two-component sensor histidine kinase BarA no 0.49
    11 DZA65_RS06325 nicotinamide mononucleotide deamidase-related protein YfaY no 0.48
    12 DZA65_RS09855 DUF2867 domain-containing protein no 0.48
    13 DZA65_RS13440 porin no 0.48
    14 DZA65_RS22920 hypothetical protein no 0.47
    15 DZA65_RS17585 ABC transporter ATP-binding protein no 0.47
    16 DZA65_RS05375 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA no 0.47
    17 DZA65_RS10130 flagellar brake protein YcgR no 0.47
    18 DZA65_RS06195 hypothetical protein no 0.46
    19 DZA65_RS04135 hypothetical protein no 0.46
    20 DZA65_RS00425 sigma-54-dependent Fis family transcriptional regulator no 0.46

    Or look for negative cofitness