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  • Top cofit genes for DZA65_RS01895 from Dickeya dianthicola ME23

    ABC transporter permease
    SEED: Nucleoside ABC transporter, permease protein 1
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04490 ribonuclease Z no 0.51
    2 DZA65_RS03825 DinI family protein no 0.50
    3 DZA65_RS06735 esterase no 0.49
    4 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no 0.48
    5 DZA65_RS19730 GDP-mannose 4,6-dehydratase no 0.48
    6 DZA65_RS05285 DNA mismatch repair endonuclease MutH no 0.48
    7 DZA65_RS19725 phosphomannomutase/phosphoglucomutase 0.14 0.47
    8 DZA65_RS05240 oxidative damage protection protein 0.49 0.46
    9 DZA65_RS18865 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC no 0.46
    10 DZA65_RS05810 phosphate response regulator transcription factor PhoB 0.31 0.46
    11 DZA65_RS19745 GDP-L-fucose synthase no 0.46
    12 DZA65_RS08680 CidA/LrgA family protein no 0.46
    13 DZA65_RS00790 glycosyltransferase family 4 protein 0.17 0.45
    14 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 0.19 0.45
    15 DZA65_RS03635 sugar transferase no 0.45
    16 DZA65_RS07115 glucose-1-phosphate thymidylyltransferase RfbA no 0.45
    17 DZA65_RS17215 polyamine aminopropyltransferase no 0.44
    18 DZA65_RS07110 dTDP-glucose 4,6-dehydratase 0.42 0.44
    19 DZA65_RS06020 endopeptidase La 0.41 0.44
    20 DZA65_RS19310 RNA polymerase-associated protein RapA no 0.44

    Or look for negative cofitness