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  • Top cofit genes for DZA65_RS01740 from Dickeya dianthicola ME23

    LysR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS14715 LysR family transcriptional regulator no 0.47
    2 DZA65_RS20790 pilus assembly protein PilM no 0.43
    3 DZA65_RS20860 RNA-binding transcriptional accessory protein no 0.42
    4 DZA65_RS14680 alcohol dehydrogenase catalytic domain-containing protein no 0.41
    5 DZA65_RS06190 bifunctional UDP-sugar hydrolase/5'-nucleotidase no 0.40
    6 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein no 0.39
    7 DZA65_RS03040 FAD:protein FMN transferase ApbE no 0.39
    8 DZA65_RS15535 avirulence protein no 0.39
    9 DZA65_RS04510 ABC transporter substrate-binding protein no 0.39
    10 DZA65_RS00690 ABC transporter permease subunit no 0.38
    11 DZA65_RS09475 response regulator transcription factor no 0.38
    12 DZA65_RS02585 hydroxyisourate hydrolase no 0.37
    13 DZA65_RS15590 isochorismate synthase no 0.37
    14 DZA65_RS03515 tRNA-Gly no 0.37
    15 DZA65_RS19235 tryptophanase no 0.37
    16 DZA65_RS10115 citrate lyase subunit alpha no 0.36
    17 DZA65_RS13065 aconitate hydratase AcnA no 0.36
    18 DZA65_RS08090 DHA2 family efflux MFS transporter permease subunit no 0.36
    19 DZA65_RS02540 amidohydrolase no 0.36
    20 DZA65_RS09575 PTS fructose transporter subunit IIBC no 0.35

    Or look for negative cofitness