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  • Top cofit genes for DZA65_RS01465 from Dickeya dianthicola ME23

    DUF1543 domain-containing protein
    SEED: FIG00613027: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07970 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ no 0.54
    2 DZA65_RS11070 ribulokinase no 0.50
    3 DZA65_RS04440 DNA oxidative demethylase AlkB no 0.49
    4 DZA65_RS20670 helix-turn-helix transcriptional regulator no 0.49
    5 DZA65_RS05195 conjugal transfer protein TraF no 0.48
    6 DZA65_RS16485 hypothetical protein no 0.47
    7 DZA65_RS10675 hypothetical protein no 0.46
    8 DZA65_RS06385 transporter substrate-binding domain-containing protein no 0.45
    9 DZA65_RS05595 3-oxoacyl-ACP reductase FabG 0.37 0.44
    10 DZA65_RS12220 type III secretion system ATPase SctN no 0.44
    11 DZA65_RS03185 ribosome assembly RNA-binding protein YhbY no 0.43
    12 DZA65_RS04335 HAMP domain-containing protein no 0.43
    13 DZA65_RS19395 ribonucleoside hydrolase RihC no 0.43
    14 DZA65_RS06245 2Fe-2S ferredoxin-like protein no 0.43
    15 DZA65_RS10885 YciU family protein no 0.43
    16 DZA65_RS14920 multicopper oxidase family protein no 0.43
    17 DZA65_RS05880 magnesium-translocating P-type ATPase no 0.42
    18 DZA65_RS09050 endonuclease/exonuclease/phosphatase family protein 0.34 0.42
    19 DZA65_RS13555 glycoside hydrolase family 31 protein no 0.42
    20 DZA65_RS22320 YgiW/YdeI family stress tolerance OB fold protein no 0.42

    Or look for negative cofitness