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  • Top cofit genes for DZA65_RS01445 from Dickeya dianthicola ME23

    HTH-type transcriptional activator AaeR
    SEED: LysR family transcriptional regulator QseA

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS16615 exodeoxyribonuclease VII large subunit 0.58 0.44
    2 DZA65_RS17260 class I SAM-dependent methyltransferase no 0.44
    3 DZA65_RS21265 thioredoxin TrxA no 0.44
    4 DZA65_RS09780 30S ribosomal protein S6--L-glutamate ligase 0.28 0.43
    5 DZA65_RS16660 type IV pilus biogenesis/stability protein PilW no 0.41
    6 DZA65_RS13005 carbon starvation protein A 0.43 0.40
    7 DZA65_RS09185 nuclear transport factor 2 family protein no 0.40
    8 DZA65_RS02335 ABC transporter ATP-binding protein no 0.40
    9 DZA65_RS11010 YciN family protein no 0.39
    10 DZA65_RS18170 2-dehydro-3-deoxyglucarate aldolase no 0.39
    11 DZA65_RS03880 ABC transporter permease no 0.37
    12 DZA65_RS07385 ATP-dependent helicase no 0.37
    13 DZA65_RS18080 phosphoadenylyl-sulfate reductase no 0.36
    14 DZA65_RS12345 SDR family oxidoreductase no 0.36
    15 DZA65_RS11635 aminodeoxychorismate synthase component 1 0.40 0.35
    16 DZA65_RS06480 tRNA(Met) cytidine acetyltransferase no 0.35
    17 DZA65_RS04760 DUF4433 domain-containing protein no 0.35
    18 DZA65_RS07285 galactonate dehydratase 0.48 0.35
    19 DZA65_RS03055 FAD:protein FMN transferase 0.39 0.34
    20 DZA65_RS04480 LysR family transcriptional regulator no 0.34

    Or look for negative cofitness