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  • Top cofit genes for DZA65_RS01400 from Dickeya dianthicola ME23

    oxidoreductase
    SEED: YhdH, a putative quinone oxidoreductase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS14290 UvrY/SirA/GacA family response regulator transcription factor 0.84 0.56
    2 DZA65_RS18155 two-component sensor histidine kinase BarA 0.86 0.52
    3 DZA65_RS09855 DUF2867 domain-containing protein 0.83 0.50
    4 DZA65_RS00730 ribonuclease PH 0.66 0.46
    5 DZA65_RS19305 DNA polymerase II 0.26 0.46
    6 DZA65_RS00385 3-oxoacyl-ACP synthase 0.56 0.44
    7 DZA65_RS09270 hypothetical protein no 0.44
    8 DZA65_RS00390 acyl carrier protein no 0.44
    9 DZA65_RS05760 methionine synthase no 0.43
    10 DZA65_RS00395 VfmB protein no 0.43
    11 DZA65_RS00515 LuxR family transcriptional regulator 0.63 0.43
    12 DZA65_RS00330 DNA-binding transcriptional regulator no 0.42
    13 DZA65_RS00410 helix-turn-helix transcriptional regulator 0.84 0.41
    14 DZA65_RS01945 FAD-dependent oxidoreductase no 0.41
    15 DZA65_RS03175 serine-type D-Ala-D-Ala carboxypeptidase 0.42 0.40
    16 DZA65_RS04285 RpoE-regulated lipoprotein 0.38 0.40
    17 DZA65_RS06995 molybdate ABC transporter ATP-binding protein ModF no 0.40
    18 DZA65_RS10210 YcbJ family phosphotransferase 0.64 0.39
    19 DZA65_RS07755 LacI family DNA-binding transcriptional regulator no 0.39
    20 DZA65_RS18640 quinone oxidoreductase 0.65 0.39

    Or look for negative cofitness