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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS01400 from
Dickeya dianthicola ME23
oxidoreductase
SEED: YhdH, a putative quinone oxidoreductase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS14290
UvrY/SirA/GacA family response regulator transcription factor
0.84
0.56
2
DZA65
_RS18155
two-component sensor histidine kinase BarA
0.86
0.52
3
DZA65
_RS09855
DUF2867 domain-containing protein
0.83
0.50
4
DZA65
_RS00730
ribonuclease PH
0.66
0.46
5
DZA65
_RS19305
DNA polymerase II
0.26
0.46
6
DZA65
_RS00385
3-oxoacyl-ACP synthase
0.56
0.44
7
DZA65
_RS09270
hypothetical protein
no
0.44
8
DZA65
_RS00390
acyl carrier protein
no
0.44
9
DZA65
_RS05760
methionine synthase
no
0.43
10
DZA65
_RS00395
VfmB protein
no
0.43
11
DZA65
_RS00515
LuxR family transcriptional regulator
0.63
0.43
12
DZA65
_RS00330
DNA-binding transcriptional regulator
no
0.42
13
DZA65
_RS00410
helix-turn-helix transcriptional regulator
0.84
0.41
14
DZA65
_RS01945
FAD-dependent oxidoreductase
no
0.41
15
DZA65
_RS03175
serine-type D-Ala-D-Ala carboxypeptidase
0.42
0.40
16
DZA65
_RS04285
RpoE-regulated lipoprotein
0.38
0.40
17
DZA65
_RS06995
molybdate ABC transporter ATP-binding protein ModF
no
0.40
18
DZA65
_RS10210
YcbJ family phosphotransferase
0.64
0.39
19
DZA65
_RS07755
LacI family DNA-binding transcriptional regulator
no
0.39
20
DZA65
_RS18640
quinone oxidoreductase
0.65
0.39
Or look for
negative cofitness