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  • Top cofit genes for DZA65_RS01045 from Dickeya dianthicola ME23

    IMPACT family protein
    SEED: FIG000605: protein co-occurring with transport systems (COG1739)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS22090 sugar ABC transporter permease no 0.39
    2 DZA65_RS18730 diguanylate cyclase 0.67 0.37
    3 DZA65_RS12695 diguanylate cyclase no 0.36
    4 DZA65_RS17470 hypothetical protein 0.57 0.35
    5 DZA65_RS21780 DUF1820 family protein no 0.35
    6 DZA65_RS12935 envelope stress response membrane protein PspC 0.49 0.35
    7 DZA65_RS03605 cation efflux system protein CusF no 0.35
    8 DZA65_RS12640 tail fiber protein no 0.34
    9 DZA65_RS04410 anaerobic nitric oxide reductase flavorubredoxin no 0.34
    10 DZA65_RS10625 DNA/RNA non-specific endonuclease no 0.34
    11 DZA65_RS11300 extracellular solute-binding protein no 0.33
    12 DZA65_RS15590 isochorismate synthase no 0.33
    13 DZA65_RS16095 acylphosphatase no 0.32
    14 DZA65_RS12360 ABC transporter permease no 0.32
    15 DZA65_RS18195 PAS domain-containing protein no 0.32
    16 DZA65_RS01710 outer membrane channel protein TolC 0.62 0.32
    17 DZA65_RS07040 sugar ABC transporter substrate-binding protein no 0.31
    18 DZA65_RS02375 HD domain-containing protein no 0.31
    19 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.48 0.31
    20 DZA65_RS14330 helix-turn-helix transcriptional regulator no 0.31

    Or look for negative cofitness