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  • Top cofit genes for DZA65_RS00840 from Dickeya dianthicola ME23

    rhodanese-like domain-containing protein
    SEED: FIG136845: Rhodanese-related sulfurtransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS16760 nickel/cobalt transporter no 0.49
    2 DZA65_RS08225 winged helix-turn-helix transcriptional regulator no 0.47
    3 DZA65_RS06920 cell division protein CpoB 0.47 0.47
    4 DZA65_RS01525 LPS export ABC transporter periplasmic protein LptC 0.30 0.44
    5 DZA65_RS16640 YfgM family protein 0.49 0.43
    6 DZA65_RS06030 peptidylprolyl isomerase 0.75 0.43
    7 DZA65_RS02510 molecular chaperone OsmY 0.48 0.41
    8 DZA65_RS13330 AI-2E family transporter YdiK no 0.41
    9 DZA65_RS07015 molybdate ABC transporter permease subunit no 0.41
    10 DZA65_RS17930 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase 0.53 0.41
    11 DZA65_RS04085 phage capsid scaffolding protein no 0.40
    12 DZA65_RS07725 hypothetical protein no 0.39
    13 DZA65_RS03330 EamA family transporter no 0.39
    14 DZA65_RS06300 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase no 0.39
    15 DZA65_RS00970 twin-arginine translocase subunit TatA no 0.39
    16 DZA65_RS00665 TolC family protein no 0.39
    17 DZA65_RS04335 HAMP domain-containing protein no 0.39
    18 DZA65_RS08990 excinuclease ABC subunit B 0.84 0.38
    19 DZA65_RS12480 NarK family nitrate/nitrite MFS transporter no 0.38
    20 DZA65_RS11655 TerC family protein 0.75 0.38

    Or look for negative cofitness