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  • Top cofit genes for DZA65_RS00610 from Dickeya dianthicola ME23

    ABC transporter ATP-binding protein
    SEED: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS09675 methyl-accepting chemotaxis protein no 0.48
    2 DZA65_RS17205 iron ABC transporter permease 0.25 0.46
    3 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ no 0.45
    4 DZA65_RS07040 sugar ABC transporter substrate-binding protein no 0.44
    5 DZA65_RS13815 IS4 family transposase no 0.43
    6 DZA65_RS13400 sulfonate ABC transporter substrate-binding protein 0.27 0.42
    7 DZA65_RS07215 lactonase family protein no 0.41
    8 DZA65_RS20845 transcription elongation factor GreB no 0.41
    9 DZA65_RS03555 hypothetical protein no 0.41
    10 DZA65_RS21150 amino acid ABC transporter permease no 0.41
    11 DZA65_RS11780 drug/metabolite DMT transporter permease no 0.40
    12 DZA65_RS14200 SDR family NAD(P)-dependent oxidoreductase no 0.40
    13 DZA65_RS04410 anaerobic nitric oxide reductase flavorubredoxin no 0.40
    14 DZA65_RS07290 MFS transporter no 0.40
    15 DZA65_RS15030 baseplate J/gp47 family protein no 0.39
    16 DZA65_RS01860 type I-E CRISPR-associated protein Cse1/CasA no 0.39
    17 DZA65_RS00320 xylose ABC transporter ATP-binding protein no 0.39
    18 DZA65_RS00985 3'-5' ssDNA/RNA exonuclease TatD no 0.39
    19 DZA65_RS12930 YcjX family protein no 0.39
    20 DZA65_RS22340 ATPase RavA no 0.39

    Or look for negative cofitness