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Cofit
Top cofit genes for DZA65_RS00570 from
Dickeya dianthicola ME23
IS3 family transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS08560
type VI secretion system baseplate subunit TssG
no
0.49
2
DZA65
_RS04145
hypothetical protein
no
0.48
3
DZA65
_RS22260
molybdopterin-guanine dinucleotide biosynthesis protein B
no
0.47
4
DZA65
_RS11210
TetR family transcriptional regulator
no
0.44
5
DZA65
_RS12800
ATP-dependent RNA helicase HrpA
no
0.42
6
DZA65
_RS22500
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
no
0.42
7
DZA65
_RS14535
LysR family transcriptional regulator
no
0.40
8
DZA65
_RS02265
DUF2291 domain-containing protein
no
0.39
9
DZA65
_RS10330
glutaredoxin 2
no
0.39
10
DZA65
_RS16300
general secretion pathway protein GspK
no
0.38
11
DZA65
_RS20095
alanyl-tRNA synthetase
no
0.38
12
DZA65
_RS18615
LysR family transcriptional regulator
no
0.38
13
DZA65
_RS20335
DNA-protecting protein DprA
no
0.38
14
DZA65
_RS20805
intracellular growth attenuator family protein
no
0.37
15
DZA65
_RS15405
tripartite tricarboxylate transporter permease
no
0.36
16
DZA65
_RS12290
pyridoxal-phosphate dependent enzyme
no
0.36
17
DZA65
_RS22165
uracil-xanthine permease
no
0.36
18
DZA65
_RS06235
NfeD family protein
no
0.35
19
DZA65
_RS04035
DUF2732 domain-containing protein
no
0.35
20
DZA65
_RS06395
galactose/methyl galactoside ABC transporter ATP-binding protein MglA
no
0.35
Or look for
negative cofitness