Top cofit genes for DZA65_RS00540 from Dickeya dianthicola ME23

transcriptional regulator
SEED: Ner-like regulatory protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DZA65_RS15140		DUF1804 family protein	no	0.45
2	DZA65_RS19840		LLM class flavin-dependent oxidoreductase	no	0.40
3	DZA65_RS09480		OFA family MFS transporter	no	0.40
4	DZA65_RS21345		acetolactate synthase 2 small subunit	no	0.38
5	DZA65_RS02965		glucuronate isomerase	no	0.38
6	DZA65_RS16235		bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	no	0.38
7	DZA65_RS16230		sugar phosphate isomerase/epimerase	no	0.37
8	DZA65_RS19810		biotin-dependent carboxyltransferase family protein	no	0.37
9	DZA65_RS19070		DNA gyrase inhibitor YacG	no	0.36
10	DZA65_RS05340		amino-acid N-acetyltransferase	no	0.36
11	DZA65_RS09360		hypothetical protein	no	0.36
12	DZA65_RS14100		HAMP domain-containing protein	no	0.36
13	DZA65_RS02230		MFS transporter	no	0.34
14	DZA65_RS18695		type I-F CRISPR-associated protein Csy3	no	0.34
15	DZA65_RS09165		peptidase M3	no	0.34
16	DZA65_RS18075		uroporphyrinogen-III C-methyltransferase	no	0.33
17	DZA65_RS02475		5-formyltetrahydrofolate cyclo-ligase	no	0.33
18	DZA65_RS01205		HesA/MoeB/ThiF family protein	no	0.33
19	DZA65_RS07490		2-aminoethylphosphonate--pyruvate transaminase	no	0.33
20	DZA65_RS18070		sulfate adenylyltransferase subunit CysD	no	0.32

Or look for negative cofitness