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  • Top cofit genes for DZA65_RS00425 from Dickeya dianthicola ME23

    sigma-54-dependent Fis family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00430 histidine kinase 0.98 0.92
    2 DZA65_RS00415 ABC transporter ATP-binding protein 0.97 0.91
    3 DZA65_RS00410 helix-turn-helix transcriptional regulator 0.97 0.81
    4 DZA65_RS04310 Dyp-type peroxidase no 0.58
    5 DZA65_RS22775 hypothetical protein no 0.57
    6 DZA65_RS19030 nucleoside-specific channel-forming protein Tsx no 0.55
    7 DZA65_RS00390 acyl carrier protein no 0.55
    8 DZA65_RS04780 hypothetical protein no 0.54
    9 DZA65_RS01315 endonuclease no 0.54
    10 DZA65_RS21465 bifunctional aspartate kinase/homoserine dehydrogenase II 0.37 0.53
    11 DZA65_RS14240 FkbM family methyltransferase no 0.53
    12 DZA65_RS18315 DUF1107 domain-containing protein no 0.51
    13 DZA65_RS07580 molybdopterin-guanine dinucleotide biosynthesis protein MobC no 0.50
    14 DZA65_RS10765 bifunctional nicotinamidase/pyrazinamidase 0.59 0.49
    15 DZA65_RS14200 SDR family NAD(P)-dependent oxidoreductase no 0.49
    16 DZA65_RS20045 TolC family protein no 0.48
    17 DZA65_RS11105 SgcJ/EcaC family oxidoreductase no 0.48
    18 DZA65_RS00575 YicC family protein 0.77 0.48
    19 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase no 0.48
    20 DZA65_RS10850 YchE family NAAT transporter 0.28 0.48

    Or look for negative cofitness