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  • Top cofit genes for DZA65_RS00380 from Dickeya dianthicola ME23

    amino acid adenylation domain-containing protein
    SEED: Peptide synthetase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07350 tannase/feruloyl esterase family alpha/beta hydrolase no 0.60
    2 DZA65_RS04305 cytosine permease 0.35 0.59
    3 DZA65_RS02270 sugar ABC transporter ATP-binding protein no 0.58
    4 DZA65_RS14110 EmmdR/YeeO family multidrug/toxin efflux MATE transporter no 0.56
    5 DZA65_RS04300 LuxR family transcriptional regulator no 0.56
    6 DZA65_RS13485 endopeptidase no 0.55
    7 DZA65_RS11970 hypothetical protein no 0.55
    8 DZA65_RS14195 SDR family NAD(P)-dependent oxidoreductase no 0.55
    9 DZA65_RS07200 YjbH domain-containing protein no 0.54
    10 DZA65_RS07695 type VI secretion system tip protein VgrG 0.38 0.54
    11 DZA65_RS20180 fumarate reductase (quinol) flavoprotein subunit no 0.53
    12 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF no 0.52
    13 DZA65_RS13765 PepSY domain-containing protein no 0.52
    14 DZA65_RS18300 peptide-methionine (S)-S-oxide reductase MsrA no 0.52
    15 DZA65_RS20270 malate synthase A no 0.52
    16 DZA65_RS15785 ABC transporter ATP-binding protein no 0.51
    17 DZA65_RS01300 amino acid ABC transporter substrate-binding protein no 0.51
    18 DZA65_RS03140 putative DNA-binding transcriptional regulator no 0.51
    19 DZA65_RS14230 KR domain-containing protein no 0.50
    20 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.49

    Or look for negative cofitness