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  • Top cofit genes for DZA65_RS00280 from Dickeya dianthicola ME23

    HAMP domain-containing protein
    SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS12915 M20/M25/M40 family metallo-hydrolase no 0.51
    2 DZA65_RS22985 hypothetical protein no 0.45
    3 DZA65_RS09685 methyl-accepting chemotaxis protein no 0.44
    4 DZA65_RS04885 RNA-directed DNA polymerase no 0.44
    5 DZA65_RS09680 methyl-accepting chemotaxis protein 0.52 0.43
    6 DZA65_RS18115 MBL fold metallo-hydrolase no 0.43
    7 DZA65_RS13800 RpiB/LacA/LacB family sugar-phosphate isomerase no 0.43
    8 DZA65_RS02710 outer membrane beta-barrel protein 0.47 0.42
    9 DZA65_RS18155 two-component sensor histidine kinase BarA 0.29 0.42
    10 DZA65_RS18105 6-carboxytetrahydropterin synthase QueD no 0.41
    11 DZA65_RS00260 DUF3053 domain-containing protein no 0.41
    12 DZA65_RS04235 DNA repair protein RecN 0.37 0.41
    13 DZA65_RS09260 allantoin permease no 0.41
    14 DZA65_RS01865 HAMP domain-containing protein no 0.41
    15 DZA65_RS03825 DinI family protein no 0.40
    16 DZA65_RS08680 CidA/LrgA family protein no 0.40
    17 DZA65_RS13860 DegT/DnrJ/EryC1/StrS family aminotransferase no 0.40
    18 DZA65_RS05090 hypothetical protein no 0.39
    19 DZA65_RS19170 L-alanine exporter AlaE no 0.39
    20 DZA65_RS14100 HAMP domain-containing protein no 0.39

    Or look for negative cofitness