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  • Top cofit genes for DDA3937_RS18290 from Dickeya dadantii 3937

    threonine/serine exporter
    SEED: FIG001826: putative inner membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DDA3937_RS08745 DeoR/GlpR transcriptional regulator no 0.49
    2 DDA3937_RS22065 transposase no 0.48
    3 DDA3937_RS02660 RNA-directed DNA polymerase no 0.46
    4 DDA3937_RS07235 response regulator transcription factor no 0.46
    5 DDA3937_RS19015 glucose-6-phosphate isomerase no 0.45
    6 DDA3937_RS06800 glycosyltransferase no 0.45
    7 DDA3937_RS18520 erythrose-4-phosphate dehydrogenase no 0.44
    8 DDA3937_RS02090 Lrp/AsnC family transcriptional regulator no 0.44
    9 DDA3937_RS04345 GDP-mannose pyrophosphatase NudK no 0.43
    10 DDA3937_RS06355 alpha-D-glucose phosphate-specific phosphoglucomutase 0.33 0.43
    11 DDA3937_RS02345 hypothetical protein no 0.42
    12 DDA3937_RS06315 PTS transporter subunit EIIC no 0.42
    13 DDA3937_RS01775 NAD(P)H-dependent oxidoreductase 0.63 0.41
    14 DDA3937_RS22350 hypothetical protein no 0.41
    15 DDA3937_RS18390 GGDEF domain-containing protein no 0.41
    16 DDA3937_RS05955 SDR family oxidoreductase 0.55 0.40
    17 DDA3937_RS18535 biosynthetic arginine decarboxylase 0.38 0.40
    18 DDA3937_RS03930 DNA phosphorothioation-dependent restriction protein DptH no 0.40
    19 DDA3937_RS19570 PilN domain-containing protein no 0.40
    20 DDA3937_RS13210 multidrug efflux MFS transporter MdtG no 0.40

    Or look for negative cofitness