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  • Top cofit genes for DDA3937_RS17070 from Dickeya dadantii 3937

    PAS domain-containing protein
    SEED: Aerotaxis sensor receptor protein
    KEGG: aerotaxis receptor

    Rank Hit Name Description Conserved? Cofitness  
    1 DDA3937_RS19690 YhcH/YjgK/YiaL family protein no 0.44
    2 DDA3937_RS17160 outer membrane protein assembly factor 0.41 0.43
    3 DDA3937_RS09750 HAMP domain-containing protein no 0.42
    4 DDA3937_RS01750 DUF1249 family protein no 0.41
    5 DDA3937_RS05620 muropeptide MFS transporter AmpG no 0.41
    6 DDA3937_RS10865 hypothetical protein no 0.41
    7 DDA3937_RS05635 trigger factor no 0.40
    8 DDA3937_RS08040 nucleoside hydrolase no 0.40
    9 DDA3937_RS09295 alpha/beta hydrolase no 0.40
    10 DDA3937_RS23455 hypothetical protein no 0.40
    11 DDA3937_RS03730 myo-inosose-2 dehydratase 0.26 0.40
    12 DDA3937_RS05665 helix-hairpin-helix domain-containing protein no 0.39
    13 DDA3937_RS03630 helix-turn-helix transcriptional regulator no 0.39
    14 DDA3937_RS03570 L,D-transpeptidase family protein no 0.39
    15 DDA3937_RS03950 DNA sulfur modification protein DndD no 0.39
    16 DDA3937_RS08275 DNA/RNA non-specific endonuclease no 0.39
    17 DDA3937_RS17155 translocation/assembly module TamB no 0.39
    18 DDA3937_RS02560 L-talarate/galactarate dehydratase 0.32 0.39
    19 DDA3937_RS15450 outer membrane protein assembly factor BamB no 0.39
    20 DDA3937_RS10715 GNAT family N-acetyltransferase no 0.38

    Or look for negative cofitness