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  • Top cofit genes for DDA3937_RS16005 from Dickeya dadantii 3937

    YacC family pilotin-like protein
    SEED: Predicted chaperone lipoprotein YacC, potentially involved in protein secretion

    Rank Hit Name Description Conserved? Cofitness  
    1 DDA3937_RS05330 hypothetical protein no 0.65
    2 DDA3937_RS10090 zinc ABC transporter permease subunit ZnuB 0.43 0.58
    3 DDA3937_RS10775 TetR/AcrR family transcriptional regulator 0.48 0.55
    4 DDA3937_RS18860 glycoside hydrolase family protein no 0.55
    5 DDA3937_RS19680 ribokinase no 0.54
    6 DDA3937_RS18610 RNA chaperone Hfq 0.57 0.54
    7 DDA3937_RS15360 amino acid ABC transporter permease no 0.53
    8 DDA3937_RS15385 antibiotic biosynthesis monooxygenase no 0.53
    9 DDA3937_RS10100 zinc ABC transporter substrate-binding protein ZnuA no 0.53
    10 DDA3937_RS11320 YniB family protein no 0.52
    11 DDA3937_RS21265 oligopeptidase A no 0.51
    12 DDA3937_RS19665 maltodextrin phosphorylase no 0.51
    13 DDA3937_RS11970 RNA chaperone ProQ 0.60 0.51
    14 DDA3937_RS07150 type II toxin-antitoxin system HipA family toxin no 0.50
    15 DDA3937_RS00050 ribokinase 0.36 0.49
    16 DDA3937_RS18955 miniconductance mechanosensitive channel MscM 0.34 0.49
    17 DDA3937_RS13805 helix-turn-helix transcriptional regulator no 0.49
    18 DDA3937_RS17255 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB 0.50 0.48
    19 DDA3937_RS10095 zinc ABC transporter ATP-binding protein ZnuC no 0.48
    20 DDA3937_RS16800 MFS transporter no 0.48

    Or look for negative cofitness