Top cofit genes for DDA3937_RS15765 from Dickeya dadantii 3937

RNA polymerase sigma factor RpoE
SEED: RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DDA3937_RS01600		outer membrane-stress sensor serine endopeptidase DegS	0.96	0.95
2	DDA3937_RS05150		sigma E protease regulator RseP	0.97	0.84
3	DDA3937_RS16765		multidrug efflux MFS transporter permease subunit EmrB	no	0.69
4	DDA3937_RS13515		protein phosphatase CheZ	no	0.69
5	DDA3937_RS00600		DcrB family lipoprotein	no	0.68
6	DDA3937_RS16760		multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	no	0.67
7	DDA3937_RS01455		AsmA2 domain-containing protein YhdP	0.47	0.64
8	DDA3937_RS00715		MCP four helix bundle domain-containing protein	no	0.63
9	DDA3937_RS13525		chemotaxis response regulator protein-glutamate methylesterase	0.65	0.62
10	DDA3937_RS03455		kdo(2)-lipid IV(A) palmitoleoyltransferase	0.37	0.62
11	DDA3937_RS17035		2-hydroxy-3-oxopropionate reductase	no	0.61
12	DDA3937_RS02580		polysaccharide biosynthesis tyrosine autokinase	0.32	0.61
13	DDA3937_RS02620		serine acetyltransferase	no	0.60
14	DDA3937_RS21375		4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase	0.21	0.60
15	DDA3937_RS02600		glycosyltransferase family 4 protein	0.44	0.59
16	DDA3937_RS08755		beta-glucosidase BglX	0.43	0.59
17	DDA3937_RS02570		outer membrane beta-barrel protein	no	0.57
18	DDA3937_RS13275		RpiB/LacA/LacB family sugar-phosphate isomerase	no	0.57
19	DDA3937_RS11925		nitrate reductase subunit alpha	no	0.56
20	DDA3937_RS11275		TerC family protein	no	0.56

Or look for negative cofitness