Top cofit genes for DDA3937_RS13785 from Dickeya dadantii 3937

helix-turn-helix transcriptional regulator
SEED: HigA protein (antitoxin to HigB)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DDA3937_RS14060		hypothetical protein	no	0.44
2	DDA3937_RS00570		hypothetical protein	no	0.44
3	DDA3937_RS13200		NADH:flavin oxidoreductase/NADH oxidase	no	0.41
4	DDA3937_RS11930		LysR family transcriptional regulator	no	0.39
5	DDA3937_RS10025		copper homeostasis protein CutC	no	0.39
6	DDA3937_RS08590		iron ABC transporter substrate-binding protein	0.61	0.39
7	DDA3937_RS00155		fatty acid biosynthesis protein FabY	no	0.38
8	DDA3937_RS12880		aliphatic sulfonates ABC transporter ATP-binding protein	no	0.37
9	DDA3937_RS10735		dicarboxylate transporter/tellurite-resistance protein TehA	no	0.37
10	DDA3937_RS15270		multidrug efflux RND transporter permease subunit MdtC	no	0.36
11	DDA3937_RS19420		LysE family translocator	no	0.36
12	DDA3937_RS20850		hypothetical protein	no	0.35
13	DDA3937_RS13600		cytochrome b562	no	0.35
14	DDA3937_RS07065		sigma-54-dependent Fis family transcriptional regulator	no	0.35
15	DDA3937_RS17760		extracellular solute-binding protein	no	0.34
16	DDA3937_RS20545		DUF202 domain-containing protein	no	0.34
17	DDA3937_RS16610		acireductone dioxygenase	no	0.34
18	DDA3937_RS07515		ABC transporter permease	no	0.34
19	DDA3937_RS12660		type II secretion system protein M	no	0.34
20	DDA3937_RS05865		2Fe-2S ferredoxin-like protein	no	0.34

Or look for negative cofitness