Top cofit genes for DDA3937_RS11645 from Dickeya dadantii 3937

response regulator transcription factor
SEED: DNA-binding response regulator, LuxR family, near polyamine transporter

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DDA3937_RS15690		type I secretion system permease/ATPase	0.24	0.62
2	DDA3937_RS15695		HlyD family efflux transporter periplasmic adaptor subunit	no	0.59
3	DDA3937_RS01650		ClpXP protease specificity-enhancing factor	0.39	0.59
4	DDA3937_RS15700		sensor domain-containing diguanylate cyclase	0.37	0.59
5	DDA3937_RS13825		DUF4209 domain-containing protein	no	0.56
6	DDA3937_RS09470		putrescine ABC transporter permease PotH	no	0.55
7	DDA3937_RS05365		HAD-IB family hydrolase	0.33	0.55
8	DDA3937_RS13060		penicillin-binding protein activator LpoB	no	0.54
9	DDA3937_RS21045		ROK family transcriptional regulator	no	0.53
10	DDA3937_RS16450		hypothetical protein	no	0.53
11	DDA3937_RS05370		alpha/beta fold hydrolase	no	0.53
12	DDA3937_RS10820		type I secretion system permease/ATPase	no	0.51
13	DDA3937_RS17445		ABC transporter permease subunit	0.47	0.51
14	DDA3937_RS03485		hypothetical protein	no	0.51
15	DDA3937_RS14860		PTS cellobiose transporter subunit IIB	no	0.51
16	DDA3937_RS15595		3-phenylpropionate MFS transporter	no	0.50
17	DDA3937_RS19295		bacterioferritin	no	0.50
18	DDA3937_RS16665		MurR/RpiR family transcriptional regulator	no	0.49
19	DDA3937_RS20090		right-handed parallel beta-helix repeat-containing protein	no	0.49
20	DDA3937_RS10680		ATP-dependent dethiobiotin synthetase BioD	0.75	0.49

Or look for negative cofitness