Top cofit genes for DDA3937_RS11475 from Dickeya dadantii 3937

23S rRNA pseudouridine(2457) synthase RluE
SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase E

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DDA3937_RS10330		YchJ family protein	0.21	0.51
2	DDA3937_RS18120		3-isopropylmalate dehydrogenase	0.15	0.49
3	DDA3937_RS16130		bifunctional chorismate mutase/prephenate dehydratase	0.14	0.49
4	DDA3937_RS18115		2-isopropylmalate synthase	no	0.49
5	DDA3937_RS18125		3-isopropylmalate dehydratase large subunit	0.15	0.48
6	DDA3937_RS01925		aspartate carbamoyltransferase	no	0.48
7	DDA3937_RS18130		3-isopropylmalate dehydratase small subunit	0.14	0.47
8	DDA3937_RS17085		FlxA-like family protein	no	0.46
9	DDA3937_RS00620		DUF1820 family protein	no	0.45
10	DDA3937_RS12855		quinone-dependent dihydroorotate dehydrogenase	no	0.44
11	DDA3937_RS07910		sensor domain-containing diguanylate cyclase	no	0.44
12	DDA3937_RS06020		phosphoribosylglycinamide formyltransferase	no	0.42
13	DDA3937_RS23045		stress response protein AzuC	no	0.41
14	DDA3937_RS18760		MarR family transcriptional regulator	no	0.41
15	DDA3937_RS09430		aspartate:alanine antiporter	no	0.41
16	DDA3937_RS01760		esterase YqiA	0.52	0.40
17	DDA3937_RS12795		FAD-binding oxidoreductase	no	0.40
18	DDA3937_RS08510		biotin synthase BioB	0.27	0.40
19	DDA3937_RS20170		acetolactate synthase 2 catalytic subunit	no	0.40
20	DDA3937_RS17430		LysR family transcriptional regulator	no	0.40

Or look for negative cofitness