Top cofit genes for DDA3937_RS09755 from Dickeya dadantii 3937

response regulator
SEED: Transcriptional regulatory protein CitB, DpiA
KEGG: two-component system, CitB family, response regulator CitB

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DDA3937_RS16845		methionine ABC transporter ATP-binding protein MetN	no	0.45
2	DDA3937_RS21410		formate-dependent uric acid utilization protein AegA	no	0.43
3	DDA3937_RS08290		VOC family protein	no	0.39
4	DDA3937_RS20590		M55 family metallopeptidase	no	0.39
5	DDA3937_RS02370		DUF1440 domain-containing protein	no	0.37
6	DDA3937_RS17930		pyruvate dehydrogenase complex transcriptional repressor PdhR	no	0.37
7	DDA3937_RS08100		triphosphoribosyl-dephospho-CoA synthase	no	0.36
8	DDA3937_RS07675		CRISPR-associated endonuclease Cas2	no	0.36
9	DDA3937_RS07165		response regulator transcription factor	no	0.35
10	DDA3937_RS02420		DNA repair protein RadA	no	0.35
11	DDA3937_RS11900		L-threonine dehydrogenase	no	0.35
12	DDA3937_RS01445		septum formation inhibitor Maf	0.64	0.34
13	DDA3937_RS14180		PLP-dependent aminotransferase family protein	no	0.34
14	DDA3937_RS15035		ABC transporter permease subunit	no	0.33
15	DDA3937_RS09275		3-oxoacyl-ACP synthase	no	0.33
16	DDA3937_RS14110		nitrate- and nitrite sensing domain-containing protein	no	0.33
17	DDA3937_RS16380		M20/M25/M40 family metallo-hydrolase	no	0.32
18	DDA3937_RS21085		aldose 1-epimerase family protein	0.62	0.32
19	DDA3937_RS20300		3'-5' ssDNA/RNA exonuclease TatD	0.42	0.32
20	DDA3937_RS03735		5-deoxy-glucuronate isomerase	no	0.32

Or look for negative cofitness