Top cofit genes for DDA3937_RS08700 from Dickeya dadantii 3937

helix-turn-helix domain-containing protein
KEGG: AraC family transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DDA3937_RS11345		sugar ABC transporter permease	no	0.62
2	DDA3937_RS11925		nitrate reductase subunit alpha	0.79	0.61
3	DDA3937_RS11650		PAS domain S-box protein	no	0.60
4	DDA3937_RS10980		tetratricopeptide repeat-containing protein	no	0.59
5	DDA3937_RS13305		hypothetical protein	no	0.58
6	DDA3937_RS03455		kdo(2)-lipid IV(A) palmitoleoyltransferase	no	0.57
7	DDA3937_RS01460		metalloprotease TldD	0.55	0.57
8	DDA3937_RS11325		cupin domain-containing protein	no	0.56
9	DDA3937_RS11355		sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	no	0.56
10	DDA3937_RS10840		hypothetical protein	0.20	0.56
11	DDA3937_RS01790		cell division protein FtsP	no	0.56
12	DDA3937_RS11920		nitrate reductase subunit beta	0.78	0.56
13	DDA3937_RS13275		RpiB/LacA/LacB family sugar-phosphate isomerase	no	0.56
14	DDA3937_RS05375		methionine synthase	no	0.56
15	DDA3937_RS11350		carbohydrate ABC transporter permease	no	0.56
16	DDA3937_RS11945		nitrate/nitrite two-component system sensor histidine kinase NarX	0.70	0.55
17	DDA3937_RS06730		glycosyltransferase family 2 protein	no	0.55
18	DDA3937_RS16760		multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	no	0.55
19	DDA3937_RS13575		Tar ligand binding domain-containing protein	no	0.54
20	DDA3937_RS13530		protein-glutamate O-methyltransferase CheR	no	0.53

Or look for negative cofitness