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Cofit
Protein
Homologs
Top cofit genes for DDA3937_RS08080 from
Dickeya dadantii 3937
PAS domain-containing protein
SEED: YheO-like PAS domain
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DDA3937
_RS11970
RNA chaperone ProQ
no
0.50
2
DDA3937
_RS07205
(Fe-S)-binding protein
no
0.48
3
DDA3937
_RS11965
carboxy terminal-processing peptidase
0.25
0.45
4
DDA3937
_RS19150
DUF1992 domain-containing protein
no
0.45
5
DDA3937
_RS15860
serine endoprotease DegP
no
0.45
6
DDA3937
_RS05725
Hha toxicity modulator TomB
no
0.45
7
DDA3937
_RS11685
HrpP protein
no
0.45
8
DDA3937
_RS17605
excinuclease ABC subunit UvrA
no
0.44
9
DDA3937
_RS15325
LacI family DNA-binding transcriptional regulator
no
0.43
10
DDA3937
_RS05070
LOG family protein
0.36
0.42
11
DDA3937
_RS03095
lipoprotein NlpI
no
0.42
12
DDA3937
_RS12385
LysR family transcriptional regulator
no
0.42
13
DDA3937
_RS02520
alkyl hydroperoxide reductase subunit F
no
0.42
14
DDA3937
_RS08430
DgsA anti-repressor MtfA
no
0.40
15
DDA3937
_RS04420
Dyp-type peroxidase
no
0.39
16
DDA3937
_RS15670
acid phosphatase AphA
no
0.39
17
DDA3937
_RS10210
GlsB/YeaQ/YmgE family stress response membrane protein
no
0.39
18
DDA3937
_RS13990
TIGR04141 family sporadically distributed protein
no
0.39
19
DDA3937
_RS14150
MFS transporter
no
0.39
20
DDA3937
_RS08990
glutaredoxin-dependent arsenate reductase
no
0.38
Or look for
negative cofitness