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  • Top cofit genes for DDA3937_RS06100 from Dickeya dadantii 3937

    M15 family metallopeptidase
    SEED: FIG009095: D,D-carboxypeptidase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DDA3937_RS05360 LysR family transcriptional regulator no 0.50
    2 DDA3937_RS02685 hypothetical protein no 0.50
    3 DDA3937_RS15135 phosphate ABC transporter ATP-binding protein no 0.50
    4 DDA3937_RS03500 ABC transporter substrate-binding protein 0.31 0.49
    5 DDA3937_RS10225 ABC transporter ATP-binding protein no 0.49
    6 DDA3937_RS20495 glycosyltransferase no 0.48
    7 DDA3937_RS00165 uracil-xanthine permease no 0.47
    8 DDA3937_RS23340 ilvB operon leader peptide IvbL no 0.47
    9 DDA3937_RS21395 DUF799 domain-containing protein no 0.47
    10 DDA3937_RS16515 hypothetical protein no 0.46
    11 DDA3937_RS08300 ABATE domain-containing protein no 0.46
    12 DDA3937_RS13070 purine nucleoside phosphoramidase 0.33 0.46
    13 DDA3937_RS00325 DUF1471 domain-containing protein no 0.45
    14 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein 0.44 0.45
    15 DDA3937_RS18190 hypothetical protein no 0.44
    16 DDA3937_RS01710 penicillin-binding protein activator 0.53 0.44
    17 DDA3937_RS21400 DUF4810 domain-containing protein no 0.44
    18 DDA3937_RS07240 GHKL domain-containing protein no 0.44
    19 DDA3937_RS09985 glutaredoxin 2 no 0.44
    20 DDA3937_RS19580 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.55 0.43

    Or look for negative cofitness