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  • Top cofit genes for DDA3937_RS05850 from Dickeya dadantii 3937

    Cu(I)-responsive transcriptional regulator
    SEED: HTH-type transcriptional regulator cueR
    KEGG: MerR family transcriptional regulator, copper efflux regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DDA3937_RS02970 malate dehydrogenase no 0.43
    2 DDA3937_RS02675 hypothetical protein no 0.42
    3 DDA3937_RS22350 hypothetical protein no 0.41
    4 DDA3937_RS21510 SUMF1/EgtB/PvdO family nonheme iron enzyme no 0.40
    5 DDA3937_RS22250 DUF2627 domain-containing protein no 0.40
    6 DDA3937_RS08385 IS3 family transposase no 0.40
    7 DDA3937_RS16260 SRPBCC family protein no 0.40
    8 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase no 0.39
    9 DDA3937_RS06900 hypothetical protein no 0.39
    10 DDA3937_RS02440 hypothetical protein no 0.39
    11 DDA3937_RS21905 restriction endonuclease no 0.39
    12 DDA3937_RS01565 phospholipid ABC transporter ATP-binding protein MlaF 0.54 0.38
    13 DDA3937_RS08220 biotin-dependent carboxyltransferase family protein no 0.38
    14 DDA3937_RS23380 hypothetical protein no 0.38
    15 DDA3937_RS09425 DNA-binding transcriptional repressor DeoR 0.65 0.38
    16 DDA3937_RS06800 glycosyltransferase no 0.38
    17 DDA3937_RS01580 phospholipid-binding protein MlaC no 0.38
    18 DDA3937_RS04040 type II toxin-antitoxin system RelE/ParE family toxin no 0.37
    19 DDA3937_RS16685 oxalurate catabolism protein HpxZ 0.37 0.37
    20 DDA3937_RS15370 hypothetical protein no 0.37

    Or look for negative cofitness