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  • Top cofit genes for DDA3937_RS04430 from Dickeya dadantii 3937

    Hcp family type VI secretion system effector
    SEED: Secreted protein Hcp

    Rank Hit Name Description Conserved? Cofitness  
    1 DDA3937_RS04705 SDR family oxidoreductase no 0.51
    2 DDA3937_RS14610 YfcZ/YiiS family protein no 0.48
    3 DDA3937_RS15300 phosphate-starvation-inducible protein PsiE no 0.47
    4 DDA3937_RS06380 potassium-transporting ATPase subunit KdpB no 0.46
    5 DDA3937_RS13610 pectate lyase no 0.45
    6 DDA3937_RS12675 prepilin-type N-terminal cleavage/methylation domain-containing protein no 0.45
    7 DDA3937_RS02700 transcriptional regulator no 0.45
    8 DDA3937_RS01730 glutathionylspermidine synthase family protein no 0.44
    9 DDA3937_RS03505 ABC transporter permease no 0.44
    10 DDA3937_RS15355 amino acid ABC transporter ATP-binding protein no 0.43
    11 DDA3937_RS05865 2Fe-2S ferredoxin-like protein 0.40 0.43
    12 DDA3937_RS06960 ankyrin repeat domain-containing protein no 0.43
    13 DDA3937_RS04780 GyrI-like domain-containing protein no 0.43
    14 DDA3937_RS15970 ABC transporter permease no 0.43
    15 DDA3937_RS05620 muropeptide MFS transporter AmpG no 0.42
    16 DDA3937_RS16520 tyrosine-type recombinase/integrase 0.39 0.42
    17 DDA3937_RS03530 DUF4880 domain-containing protein no 0.42
    18 DDA3937_RS12690 type II secretion system F family protein no 0.42
    19 DDA3937_RS21145 GNAT family N-acetyltransferase no 0.42
    20 DDA3937_RS11870 SIR2 family protein no 0.42

    Or look for negative cofitness