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  • Top cofit genes for DDA3937_RS02090 from Dickeya dadantii 3937

    Lrp/AsnC family transcriptional regulator
    SEED: Transcriptional regulator, AsnC family

    Rank Hit Name Description Conserved? Cofitness  
    1 DDA3937_RS04340 Nramp family divalent metal transporter 0.57 0.57
    2 DDA3937_RS10645 YdgA family protein no 0.56
    3 DDA3937_RS18445 inosine/xanthosine triphosphatase no 0.56
    4 DDA3937_RS00025 low affinity potassium transporter Kup no 0.55
    5 DDA3937_RS15230 TIGR01666 family membrane protein no 0.55
    6 DDA3937_RS02020 DEAD/DEAH box helicase no 0.55
    7 DDA3937_RS02880 hexose-6-phosphate:phosphate antiporter no 0.54
    8 DDA3937_RS19815 glycerol-3-phosphate transporter no 0.54
    9 DDA3937_RS21265 oligopeptidase A 0.50 0.54
    10 DDA3937_RS02875 MFS transporter no 0.54
    11 DDA3937_RS06800 glycosyltransferase no 0.53
    12 DDA3937_RS06355 alpha-D-glucose phosphate-specific phosphoglucomutase no 0.53
    13 DDA3937_RS03370 RelA/SpoT domain-containing protein no 0.53
    14 DDA3937_RS01520 PTS IIA-like nitrogen regulatory protein PtsN 0.33 0.52
    15 DDA3937_RS02865 transcriptional regulator UhpA no 0.52
    16 DDA3937_RS06550 nicotinamide riboside transporter PnuC no 0.52
    17 DDA3937_RS03920 DNA phosphorothioation-dependent restriction protein DptF no 0.51
    18 DDA3937_RS11500 two-component system response regulator PhoP no 0.51
    19 DDA3937_RS01575 outer membrane lipid asymmetry maintenance protein MlaD no 0.50
    20 DDA3937_RS22500 ribosome alternative rescue factor ArfA no 0.50

    Or look for negative cofitness