Top cofit genes for DDA3937_RS00990 from Dickeya dadantii 3937

tRNA (uridine(54)-C5)-methyltransferase TrmA
SEED: tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35)
KEGG: tRNA (uracil-5-)-methyltransferase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DDA3937_RS13495		flagellar export chaperone FlgN	no	0.76
2	DDA3937_RS13435		flagellar hook-associated protein FlgK	0.66	0.75
3	DDA3937_RS13430		flagellar hook-associated protein FlgL	no	0.75
4	DDA3937_RS15705		cyclic-guanylate-specific phosphodiesterase	0.81	0.75
5	DDA3937_RS11465		EAL domain-containing protein	no	0.75
6	DDA3937_RS05420		exonuclease subunit SbcD	no	0.74
7	DDA3937_RS13340		flagellin FliC	no	0.74
8	DDA3937_RS13320		ATP-grasp domain-containing protein	no	0.74
9	DDA3937_RS13565		flagellar transcriptional regulator FlhD	no	0.74
10	DDA3937_RS13560		flagellar transcriptional regulator FlhC	no	0.73
11	DDA3937_RS13315		Gfo/Idh/MocA family oxidoreductase	no	0.73
12	DDA3937_RS13330		methyltransferase regulatory domain-containing protein	no	0.73
13	DDA3937_RS19660		4-alpha-glucanotransferase	no	0.73
14	DDA3937_RS13550		flagellar motor protein MotB	no	0.72
15	DDA3937_RS13325		DegT/DnrJ/EryC1/StrS family aminotransferase	0.37	0.71
16	DDA3937_RS13555		flagellar motor stator protein MotA	no	0.70
17	DDA3937_RS06740		glucose-1-phosphate thymidylyltransferase RfbA	0.33	0.69
18	DDA3937_RS13310		FkbM family methyltransferase	no	0.69
19	DDA3937_RS13300		RNA polymerase sigma factor FliA	0.79	0.69
20	DDA3937_RS13395		flagellar basal body-associated protein FliL	no	0.68

Or look for negative cofitness