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Cofit
Protein
Homologs
Top cofit genes for BNILDI_09600 from
Escherichia coli ECRC62
ShiA-like protein
SEED: ShiA homolog
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BNILDI
_20040
fimbrial biogenesis usher protein
no
0.85
2
BNILDI
_09535
STY4851/ECs_5259 family protein
no
0.75
3
BNILDI
_04415
tnaA
tryptophanase
no
0.74
4
BNILDI
_07655
fimB
type 1 fimbria switch DNA invertase FimB
no
0.70
5
BNILDI
_17175
GntR family transcriptional regulator
no
0.70
6
BNILDI
_09215
rof
Rho-binding antiterminator
no
0.69
7
BNILDI
_04795
trxA
thioredoxin TrxA
no
0.68
8
BNILDI
_06660
eptA
phosphoethanolamine transferase EptA
no
0.67
9
BNILDI
_18665
narG
nitrate reductase subunit alpha
no
0.67
10
BNILDI
_10775
cas7e
type I-E CRISPR-associated protein Cas7/Cse4/CasC
no
0.66
11
BNILDI
_03685
avtA
valine--pyruvate transaminase
no
0.64
12
BNILDI
_08435
surA
peptidylprolyl isomerase SurA
no
0.64
13
BNILDI
_01295
yhaJ
DNA-binding transcriptional regulator YhaJ
no
0.64
14
BNILDI
_04275
glvC
PTS sugar transporter subunit IIB
no
0.64
15
BNILDI
_10450
tssC
type VI secretion system contractile sheath large subunit
no
0.63
16
BNILDI
_06730
ghoS
type V toxin-antitoxin system endoribonuclease antitoxin GhoS
no
0.62
17
BNILDI
_22335
gcl
glyoxylate carboligase
no
0.62
18
BNILDI
_11815
ung
uracil-DNA glycosylase
no
0.62
19
BNILDI
_22655
ybaV
Uncharacterized protein YbaV
no
0.61
20
BNILDI
_13590
glpQ
glycerophosphodiester phosphodiesterase
no
0.61
Or look for
negative cofitness