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Cofit
Protein
Homologs
Top cofit genes for BNILDI_07945 from
Escherichia coli ECRC62
citB
:
DNA-binding response regulator
SEED: Putative regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
BNILDI
_10920
mutS
DNA mismatch repair protein MutS
no
0.78
2
BNILDI
_03370
yhjE
Inner membrane metabolite transport protein YhjE
no
0.74
3
BNILDI
_10925
hypothetical protein
no
0.73
4
BNILDI
_13680
rcsB
transcriptional regulator RcsB
0.48
0.72
5
BNILDI
_06395
pdeC
c-di-GMP phosphodiesterase PdeC
0.70
0.71
6
BNILDI
_08930
fimbrial-like adhesin
no
0.69
7
BNILDI
_17470
LysR family transcriptional regulator
no
0.69
8
BNILDI
_05720
metL
bifunctional aspartate kinase/homoserine dehydrogenase II
no
0.63
9
BNILDI
_02830
glgC
glucose-1-phosphate adenylyltransferase
no
0.63
10
BNILDI
_12310
hyfR
DNA-binding transcriptional regulator HyfR
0.59
0.63
11
BNILDI
_06700
fumB
class I fumarate hydratase
no
0.62
12
BNILDI
_14420
parE
type II toxin-antitoxin system RelE/ParE family toxin
no
0.62
13
BNILDI
_10900
otnK
3-oxo-tetronate kinase
no
0.61
14
BNILDI
_20645
ybjI
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase
no
0.61
15
BNILDI
_19865
hybD
hydrogenase 1 maturation protease
no
0.61
16
BNILDI
_08995
hrpB
ATP-dependent helicase HrpB
0.64
0.61
17
BNILDI
_04185
uhpB
signal transduction histidine-protein kinase/phosphatase UhpB
0.37
0.60
18
BNILDI
_01765
yrbG
calcium/sodium antiporter
no
0.60
19
BNILDI
_15945
yeaR
Uncharacterized protein YeaR
no
0.60
20
BNILDI
_03410
bcsZ
cellulose synthase complex periplasmic endoglucanase BcsZ
no
0.60
Or look for
negative cofitness