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  • Top cofit genes for Atu6041 from Agrobacterium fabrum C58

    conjugal transfer protein
    SEED: Conjugative transfer protein TrbB
    KEGG: type IV secretion system protein VirB11

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1803 cold shock protein no 0.21
    2 Atu4711 two component sensor kinase no 0.19
    3 Atu3278 aryl-alcohol dehydrogenase no 0.18
    4 Atu0480 polysaccharide biosynthesis protein no 0.18
    5 Atu1117 hypothetical protein no 0.18
    6 Atu4162 two-component response regulator no 0.17
    7 Atu0296 NADH-ubiquinone oxidoreductase no 0.17
    8 Atu4432 oligopeptide ABC transporter permease no 0.17
    9 Atu1364 ATP-dependent Clp protease, ATP-binding subunit no 0.16
    10 Atu2373 UDP-hexose transferase no 0.16
    11 Atu1877 OmpA family protein no 0.16
    12 Atu2425 ABC transporter, nucleotide binding/ATPase protein no 0.15
    13 Atu2521 Protein regulated by acid pH no 0.15
    14 Atu1022 soluble lytic transglycosylase no 0.15
    15 Atu3415 ABC transporter substrate binding protein no 0.15
    16 Atu0499 hypothetical protein no 0.15
    17 Atu0666 glycolate oxidase subunit no 0.15
    18 Atu5132 ABC transporter membrane spanning protein no 0.15
    19 Atu3744 ABC transporter permease no 0.15
    20 Atu8188 hypothetical protein no 0.15

    Or look for negative cofitness