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  • Top cofit genes for Atu6040 from Agrobacterium fabrum C58

    conjugal transfer protein
    SEED: Conjugative transfer protein TrbC
    KEGG: type IV secretion system protein VirB2

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu2220 hypothetical protein no 0.19
    2 Atu3802 proline/glycine betaine ABC transporter ATPase no 0.17
    3 Atu1314 transcriptional regulator, TetR family no 0.17
    4 Atu3128 di-trans,poly-cis-decaprenylcistransferase no 0.17
    5 Atu0311 hypothetical protein no 0.16
    6 Atu1338 3-oxoacyl-(acyl carrier protein) reductase no 0.16
    7 Atu4683 hypothetical protein no 0.15
    8 Atu2442 hypothetical protein no 0.15
    9 Atu4286 hypothetical protein no 0.14
    10 Atu4632 ATP-dependent DNA ligase no 0.14
    11 Atu8156 hypothetical protein no 0.14
    12 Atu6054 conserved hypothetical protein no 0.14
    13 Atu4768 hypothetical protein no 0.14
    14 Atu3814 hypothetical protein no 0.14
    15 Atu1483 cytochrome b561 no 0.14
    16 Atu4736 methyl-accepting chemotaxis protein no 0.14
    17 Atu0672 transcriptional regulator, LysR family no 0.14
    18 Atu6133 conserved hypothetical protein no 0.14
    19 Atu3259 dehydrogenase no 0.13
    20 Atu3786 two component response regulator no 0.13

    Or look for negative cofitness