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  • Top cofit genes for Atu6038 from Agrobacterium fabrum C58

    conjugal transfer protein
    SEED: Conjugative transfer protein TrbE
    KEGG: type IV secretion system protein VirB4

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu2648 hypothetical protein no 0.21
    2 Atu0422 ABC transporter, membrane spanning protein no 0.18
    3 Atu0659 NTP pyrophosphohydrolase, MutT family no 0.16
    4 Atu0602 glutamine synthetase no 0.16
    5 Atu1875 carbohydrate kinase no 0.16
    6 Atu0601 oxidoreductase no 0.16
    7 Atu5100 DNA polymerase III, alpha chain no 0.16
    8 Atu1830 bacterioferritin comigratory protein 0.44 0.16
    9 Atu0499 hypothetical protein no 0.16
    10 Atu6031 conjugal transfer protein no 0.15
    11 Atu2165 bacteriophytochrome protein no 0.15
    12 Atu1874 RecA protein no 0.15
    13 Atu0421 ABC transporter, membrane spanning protein no 0.15
    14 Atu8122 hypothetical protein no 0.14
    15 Atu1907 ABC transporter, nucleotide binding/ATPase protein no 0.14
    16 Atu6042 autoinducer synthesis protein no 0.14
    17 Atu0188 ABC transporter, membrane spanning protein (peptide) no 0.14
    18 Atu1285 metal dependent hydrolase no 0.14
    19 Atu0801 chromosome segregation protein no 0.14
    20 Atu3638 hypothetical protein no 0.14

    Or look for negative cofitness