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  • Top cofit genes for Atu6038 from Agrobacterium fabrum C58

    conjugal transfer protein
    SEED: Conjugative transfer protein TrbE
    KEGG: type IV secretion system protein VirB4

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu2648 hypothetical protein no 0.21
    2 Atu0422 ABC transporter, membrane spanning protein no 0.17
    3 Atu0659 NTP pyrophosphohydrolase, MutT family no 0.16
    4 Atu0602 glutamine synthetase no 0.16
    5 Atu0601 oxidoreductase no 0.16
    6 Atu1830 bacterioferritin comigratory protein 0.44 0.16
    7 Atu0499 hypothetical protein no 0.16
    8 Atu6031 conjugal transfer protein no 0.15
    9 Atu5100 DNA polymerase III, alpha chain no 0.15
    10 Atu1875 carbohydrate kinase no 0.15
    11 Atu6042 autoinducer synthesis protein no 0.15
    12 Atu2165 bacteriophytochrome protein no 0.15
    13 Atu5007 santhopine-responsive transcriptional repressor no 0.15
    14 Atu0421 ABC transporter, membrane spanning protein no 0.15
    15 Atu5101 hypothetical protein no 0.14
    16 Atu0801 chromosome segregation protein no 0.14
    17 Atu1874 RecA protein no 0.14
    18 Atu1907 ABC transporter, nucleotide binding/ATPase protein no 0.14
    19 Atu1470 Camphor resistance protein no 0.14
    20 Atu1285 metal dependent hydrolase no 0.14

    Or look for negative cofitness