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  • Top cofit genes for Atu6033 from Agrobacterium fabrum C58

    conjugal transfer protein
    SEED: Conjugative transfer protein TrbG
    KEGG: type IV secretion system protein VirB9

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu6179 virA/G regulated protein no 0.18
    2 Atu3787 two component sensor kinase no 0.17
    3 Atu8202 hypothetical protein no 0.15
    4 Atu3228 DNA polymerase III subunit alpha no 0.15
    5 Atu0468 hypothetical protein no 0.14
    6 Atu1209 transcriptional regulator, LysR family no 0.14
    7 Atu1468 hypothetical protein no 0.14
    8 Atu0236 hypothetical protein no 0.14
    9 Atu3017 phosphoglyceromutase no 0.14
    10 Atu2090 ABC transporter, membrane spanning protein (sugar) no 0.14
    11 Atu0457 hypothetical protein no 0.14
    12 Atu0464 hypothetical protein no 0.14
    13 Atu0858 putative carboxymuconolactone decarboxylase no 0.14
    14 Atu4394 hypothetical protein no 0.14
    15 Atu1329 leucyl/phenylalanyl-tRNA-protein transferase no 0.14
    16 Atu4067 hypothetical protein no 0.14
    17 Atu1301 hypothetical protein no 0.14
    18 Atu4114 dipeptide ABC transporter permease no 0.13
    19 Atu0654 transcriptional regulator, LysR family no 0.13
    20 Atu2452 hypothetical protein no 0.13

    Or look for negative cofitness