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  • Top cofit genes for Atu6029 from Agrobacterium fabrum C58

    transcriptional regulator, LysR family for nopaline metabolism
    SEED: LysR-type transcriptional regulator for nopaline catabolism NocR

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu6025 ABC transporter, membrane spanning protein (nopaline) 0.53 0.49
    2 Atu6028 ABC transporter, nucleotide binding/ATPase protein (nopaline) 0.51 0.44
    3 Atu6026 ABC transporter, membrane spanning protein (nopaline) no 0.36
    4 Atu6018 arginase no 0.34
    5 Atu6017 NAD/NADP octopine/nopaline dehydrogenase no 0.33
    6 Atu6142 ABC transporter, membrane spanning protein (agrocinopine) no 0.33
    7 Atu6143 ABC transporter, membrane spanning protein (agrocinopine) no 0.32
    8 Atu6139 ABC transporter, substrate binding protein (agrocinopines A and B) no 0.32
    9 Atu6019 D-nopaline dehydrogenase 0.17 0.31
    10 Atu6141 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) no 0.30
    11 Atu6020 conserved hypothetical protein no 0.30
    12 Atu6016 ornithine cyclodeaminase no 0.30
    13 Atu6140 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) no 0.29
    14 Atu6144 agrocinopine phosphodiesterase no 0.27
    15 Atu6027 ABC transporter, substrate binding protein (nopaline) no 0.27
    16 Atu0480 polysaccharide biosynthesis protein no 0.27
    17 Atu6021 D-nopaline dehydrogenase 0.46 0.26
    18 Atu2373 UDP-hexose transferase no 0.25
    19 Atu1238 polysaccharide export protein no 0.25
    20 Atu0482 polysaccharide deacetylase no 0.23

    Or look for negative cofitness