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  • Top cofit genes for Atu6029 from Agrobacterium fabrum C58

    transcriptional regulator, LysR family for nopaline metabolism
    SEED: LysR-type transcriptional regulator for nopaline catabolism NocR

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu6025 ABC transporter, membrane spanning protein (nopaline) 0.53 0.49
    2 Atu6028 ABC transporter, nucleotide binding/ATPase protein (nopaline) 0.51 0.45
    3 Atu6026 ABC transporter, membrane spanning protein (nopaline) no 0.37
    4 Atu6018 arginase no 0.35
    5 Atu6017 NAD/NADP octopine/nopaline dehydrogenase no 0.33
    6 Atu6139 ABC transporter, substrate binding protein (agrocinopines A and B) no 0.33
    7 Atu6142 ABC transporter, membrane spanning protein (agrocinopine) no 0.33
    8 Atu6143 ABC transporter, membrane spanning protein (agrocinopine) no 0.32
    9 Atu6019 D-nopaline dehydrogenase 0.30 0.31
    10 Atu6141 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) no 0.30
    11 Atu6016 ornithine cyclodeaminase no 0.30
    12 Atu6140 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) no 0.30
    13 Atu6020 conserved hypothetical protein no 0.30
    14 Atu0480 polysaccharide biosynthesis protein no 0.28
    15 Atu6144 agrocinopine phosphodiesterase no 0.28
    16 Atu6027 ABC transporter, substrate binding protein (nopaline) no 0.27
    17 Atu6021 D-nopaline dehydrogenase 0.46 0.26
    18 Atu2373 UDP-hexose transferase no 0.25
    19 Atu1238 polysaccharide export protein no 0.25
    20 Atu0482 polysaccharide deacetylase no 0.24

    Or look for negative cofitness