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  • Top cofit genes for Atu5513 from Agrobacterium fabrum C58

    cold shock protein
    SEED: Cold shock protein CspA
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0217 components of type IV pilus no 0.18
    2 Atu4811 UDP-phosphate alpha N-acetylglucosaminyltransferase no 0.16
    3 Atu2726 pyruvate carboxylase no 0.16
    4 Atu5521 ABC transporter nucleotide binding/ATPase (branched chain amino acid) no 0.16
    5 Atu4820 hypothetical protein no 0.15
    6 Atu2441 RNA methylase no 0.15
    7 Atu4108 ribonuclease D no 0.15
    8 Atu0504 hypothetical protein no 0.14
    9 Atu3808 LysR family transcriptional regulator 0.52 0.14
    10 Atu4834 6-phosphogluconate dehydrogenase no 0.14
    11 Atu2497 hydrolase no 0.14
    12 Atu2389 ABC transporter, membrane spanning protein no 0.14
    13 Atu5091 Curdlan synthesis protein no 0.14
    14 Atu4669 hypothetical protein no 0.14
    15 Atu4683 hypothetical protein no 0.13
    16 Atu4490 diguanylate cyclase no 0.13
    17 Atu3784 glutamate synthase large subunit no 0.13
    18 Atu3153 AraC family transcriptional regulator no 0.13
    19 Atu4192 oligopeptide ABC transporter substrate-binding protein no 0.13
    20 Atu3483 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.13

    Or look for negative cofitness