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  • Top cofit genes for Atu5051 from Agrobacterium fabrum C58

    ATP-dependent DNA ligase
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0103 penicillin-binding protein no 0.22
    2 Atu5413 ABC transporter membrane spanning protein no 0.20
    3 Atu5033 hypothetical protein no 0.20
    4 Atu4859 hypothetical protein no 0.19
    5 Atu5069 ABC transporter membrane spanning protein (oligopeptide) no 0.19
    6 Atu3481 enoyl-CoA hydratase no 0.18
    7 Atu3039 hydantoinase beta subunit-like protein no 0.18
    8 Atu5058 ABC transporter substrate binding protein (glycerol-3-phosphate) no 0.18
    9 Atu5055 ATP-dependent DNA ligase no 0.17
    10 Atu1609 hypothetical protein no 0.17
    11 Atu5497 hypothetical protein no 0.17
    12 Atu5177 efflux protein no 0.16
    13 Atu5005 deoxyfructosyl-amino acid ABC-type membrane transporter no 0.16
    14 Atu4864 MarR family transcriptional regulator no 0.16
    15 Atu5056 hypothetical protein no 0.16
    16 Atu3037 dipeptide ABC transporter permease no 0.16
    17 Atu5424 oxidoreductase 0.18 0.16
    18 Atu1191 hypothetical protein no 0.16
    19 Atu1779 hypothetical protein no 0.16
    20 Atu5068 ABC transporter nucleotide binding/ATPase (oligopeptide) no 0.15

    Or look for negative cofitness