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  • Top cofit genes for Atu4705 from Agrobacterium fabrum C58

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4708 formate dehydrogenase alpha subunit 0.98 0.51
    2 Atu4710 MFS permease 0.50 0.48
    3 Atu4707 NADH ubiquinone oxidoreductase chain F 0.98 0.42
    4 Atu4706 formate dehydrogenase subunit gamma 0.95 0.34
    5 Atu4077 glycogen branching protein no 0.18
    6 Atu6105 conserved hypothetical protein no 0.17
    7 Atu4087 zinc-binding dehydrogenase no 0.16
    8 Atu4078 glycogen phosphorylase 0.32 0.16
    9 Atu0408 ABC transporter, membrane spanning protein no 0.14
    10 Atu4085 2-hydroxy-3-oxopropionate reductase no 0.14
    11 Atu5191 hypothetical protein no 0.14
    12 Atu3718 hypothetical protein no 0.14
    13 Atu1339 ribonuclease E no 0.14
    14 Atu2614 hypothetical protein no 0.14
    15 Atu2174 hypothetical protein no 0.14
    16 Atu3616 hypothetical protein no 0.14
    17 Atu2587 ABC transporter, substrate binding protein (oligopeptide) no 0.14
    18 Atu0098 mutT/nudix family protein no 0.13
    19 Atu2270 ATP-dependent Clp protease, proteolytic subunit no 0.13
    20 Atu1758 hypothetical protein no 0.13

    Or look for negative cofitness