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  • Top cofit genes for Atu4664 from Agrobacterium fabrum C58

    oligopeptide ABC transporter ATPase
    SEED: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4661 alpha-galactoside ABC transporter substrate-binding protein 0.85 0.92
    2 Atu4662 oligopeptide ABC transporter permease 0.86 0.88
    3 Atu4663 oligopeptide ABC transporter permease 0.77 0.88
    4 Atu4660 alpha-galactosidase 0.80 0.87
    5 Atu4665 alpha-galactosidase 0.87 0.86
    6 Atu4659 AraC family transcriptional regulator 0.82 0.85
    7 Atu0704 2-dehydro-3-deoxygalactonate kinase 0.29 0.53
    8 Atu0703 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 0.40 0.41
    9 Atu0705 3-oxoacyl-(acyl carrier protein) reductase no 0.38
    10 Atu1113 dehydrogenase no 0.23
    11 Atu6002 C protein no 0.21
    12 Atu0876 superoxide dismutase 0.31 0.19
    13 Atu6183 virA/G regulated protein no 0.19
    14 Atu3207 diguanylate cyclase no 0.19
    15 Atu0792 hypothetical protein no 0.19
    16 Atu3219 dihydroxy-acid dehydratase no 0.19
    17 Atu6190 exported virulence protein no 0.19
    18 Atu6185 virA/G regulated protein no 0.18
    19 Atu4097 L-aspartate oxidase no 0.17
    20 Atu4490 diguanylate cyclase no 0.17

    Or look for negative cofitness