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  • Top cofit genes for Atu4661 from Agrobacterium fabrum C58

    alpha-galactoside ABC transporter substrate-binding protein
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4664 oligopeptide ABC transporter ATPase 0.85 0.92
    2 Atu4663 oligopeptide ABC transporter permease 0.88 0.90
    3 Atu4660 alpha-galactosidase 0.87 0.89
    4 Atu4665 alpha-galactosidase 0.92 0.88
    5 Atu4662 oligopeptide ABC transporter permease 0.93 0.88
    6 Atu4659 AraC family transcriptional regulator 0.88 0.88
    7 Atu0704 2-dehydro-3-deoxygalactonate kinase 0.27 0.53
    8 Atu0703 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 0.42 0.42
    9 Atu0705 3-oxoacyl-(acyl carrier protein) reductase 0.17 0.37
    10 Atu1113 dehydrogenase no 0.25
    11 Atu4097 L-aspartate oxidase no 0.24
    12 Atu0792 hypothetical protein no 0.24
    13 Atu6190 exported virulence protein no 0.23
    14 Atu0641 hypothetical protein no 0.22
    15 Atu0876 superoxide dismutase 0.41 0.22
    16 Atu4098 quinolinate synthetase no 0.22
    17 Atu3219 dihydroxy-acid dehydratase no 0.21
    18 Atu2719 aldose epimerase 0.38 0.20
    19 Atu4096 nicotinate-nucleotide pyrophosphorylase no 0.20
    20 Atu3997 biotin synthetase no 0.19

    Or look for negative cofitness