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  • Top cofit genes for Atu4632 from Agrobacterium fabrum C58

    ATP-dependent DNA ligase
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
    KEGG: DNA ligase (ATP)

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4636 AcrB/AcrD/AcrF family protein no 0.24
    2 Atu3187 glycerol-3-phosphate ABC transporter permease no 0.21
    3 Atu4367 LysR family transcriptional regulator 0.22 0.21
    4 Atu4722 gamma-glutamyltranspeptidase 0.39 0.20
    5 Atu3285 alpha-glucosidase no 0.20
    6 Atu1974 cyclopropane-fatty-acyl-phospholipid synthase no 0.19
    7 Atu3562 hypothetical protein no 0.18
    8 Atu2261 hypothetical protein 0.22 0.18
    9 Atu0658 phosphate permease no 0.17
    10 Atu1698 molybdopterin-guanine dinucleotide biosynthesis protein A no 0.17
    11 Atu8085 hypothetical protein no 0.17
    12 Atu2245 Na+/Pi-cotransporter 0.45 0.17
    13 Atu3439 acyl-CoA dehydrogenase no 0.17
    14 Atu0482 polysaccharide deacetylase no 0.17
    15 Atu1068 hypothetical protein 0.53 0.16
    16 Atu4410 periplasmic nitrate reductase, cytochrome c-type protein no 0.16
    17 Atu4726 superoxide dismutase no 0.16
    18 Atu4400 ferrienterobactin-like protein no 0.16
    19 Atu1756 hypothetical protein no 0.16
    20 Atu4394 hypothetical protein no 0.16

    Or look for negative cofitness