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  • Top cofit genes for Atu4549 from Agrobacterium fabrum C58

    beta-ketoadipyl CoA thiolase
    SEED: Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
    KEGG: acetyl-CoA acyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4547 3-oxoadipate CoA-transferase subunit A 0.93 0.93
    2 Atu4548 3-oxoadipate CoA-transferase subunit B 0.96 0.92
    3 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase 0.76 0.89
    4 Atu4542 beta-ketoadipate enol-lactone hydrolase 0.96 0.88
    5 Atu4539 protocatechuate 3,4-dioxygenase alpha chain 0.92 0.85
    6 Atu4541 carboxymuconolactone decarboxylase 0.95 0.69
    7 Atu4543 LysR family transcriptional regulator 0.88 0.68
    8 Atu4546 IclR family transcriptional regulator 0.91 0.52
    9 Atu4540 protocatechuate 3,4-dioxygenase subunit beta 0.95 0.51
    10 Atu4533 amino acid ABC transporter ATPase/permease no 0.49
    11 Atu4529 hypothetical protein 0.49 0.49
    12 Atu4534 amino acid ABC transporter substrate-binding protein no 0.45
    13 Atu4531 3-dehydroquinate dehydratase 0.53 0.43
    14 Atu4537 amino acid ABC transporter permease no 0.39
    15 Atu4535 amino acid ABC transporter substrate-binding protein no 0.39
    16 Atu4536 amino acid ABC transporter permease no 0.39
    17 Atu4517 branched chain amino acid ABC transporter permease 0.40 0.38
    18 Atu0536 hypothetical protein no 0.36
    19 Atu2115 pyrophosphate--fructose-6-phosphate 1-phosphotransferase no 0.35
    20 Atu4532 shikimate 5-dehydrogenase 0.56 0.35

    Or look for negative cofitness