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  • Top cofit genes for Atu4547 from Agrobacterium fabrum C58

    3-oxoadipate CoA-transferase subunit A
    SEED: 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
    KEGG: 3-oxoadipate CoA-transferase, alpha subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4548 3-oxoadipate CoA-transferase subunit B 0.96 0.94
    2 Atu4549 beta-ketoadipyl CoA thiolase 0.93 0.93
    3 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase 0.77 0.91
    4 Atu4542 beta-ketoadipate enol-lactone hydrolase 0.91 0.91
    5 Atu4539 protocatechuate 3,4-dioxygenase alpha chain 0.91 0.87
    6 Atu4541 carboxymuconolactone decarboxylase 0.90 0.70
    7 Atu4543 LysR family transcriptional regulator 0.91 0.68
    8 Atu4529 hypothetical protein 0.57 0.56
    9 Atu4546 IclR family transcriptional regulator 0.89 0.54
    10 Atu4533 amino acid ABC transporter ATPase/permease no 0.53
    11 Atu4534 amino acid ABC transporter substrate-binding protein no 0.52
    12 Atu4540 protocatechuate 3,4-dioxygenase subunit beta 0.93 0.51
    13 Atu4531 3-dehydroquinate dehydratase 0.44 0.49
    14 Atu4536 amino acid ABC transporter permease no 0.46
    15 Atu4537 amino acid ABC transporter permease no 0.44
    16 Atu4535 amino acid ABC transporter substrate-binding protein no 0.42
    17 Atu4517 branched chain amino acid ABC transporter permease 0.59 0.40
    18 Atu4532 shikimate 5-dehydrogenase 0.57 0.38
    19 Atu0536 hypothetical protein no 0.34
    20 Atu4505 LacI family transcriptional regulator 0.57 0.33

    Or look for negative cofitness