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  • Top cofit genes for Atu4541 from Agrobacterium fabrum C58

    carboxymuconolactone decarboxylase
    SEED: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
    KEGG: 4-carboxymuconolactone decarboxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4542 beta-ketoadipate enol-lactone hydrolase 0.96 0.77
    2 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase 0.36 0.70
    3 Atu4547 3-oxoadipate CoA-transferase subunit A 0.90 0.69
    4 Atu4549 beta-ketoadipyl CoA thiolase 0.95 0.69
    5 Atu4548 3-oxoadipate CoA-transferase subunit B 0.85 0.67
    6 Atu4539 protocatechuate 3,4-dioxygenase alpha chain 0.94 0.65
    7 Atu4543 LysR family transcriptional regulator 0.89 0.50
    8 Atu0536 hypothetical protein no 0.47
    9 Atu0803 pyruvate,orthophosphate dikinase no 0.45
    10 Atu4546 IclR family transcriptional regulator 0.95 0.41
    11 Atu4529 hypothetical protein 0.57 0.41
    12 Atu0981 glutamate-ammonia-ligase adenylyltransferase no 0.41
    13 Atu4540 protocatechuate 3,4-dioxygenase subunit beta 0.96 0.37
    14 Atu3356 malic enzyme 0.43 0.37
    15 Atu1748 NIFU-like protein no 0.37
    16 Atu4098 quinolinate synthetase no 0.37
    17 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.25 0.36
    18 Atu4533 amino acid ABC transporter ATPase/permease no 0.36
    19 Atu3731 5-formyltetrahydrofolate cyclo-ligase no 0.36
    20 Atu4531 3-dehydroquinate dehydratase 0.61 0.36

    Or look for negative cofitness