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  • Top cofit genes for Atu4540 from Agrobacterium fabrum C58

    protocatechuate 3,4-dioxygenase subunit beta
    SEED: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
    KEGG: protocatechuate 3,4-dioxygenase, beta subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4539 protocatechuate 3,4-dioxygenase alpha chain 0.96 0.55
    2 Atu4547 3-oxoadipate CoA-transferase subunit A 0.93 0.51
    3 Atu4549 beta-ketoadipyl CoA thiolase 0.95 0.51
    4 Atu4548 3-oxoadipate CoA-transferase subunit B 0.92 0.51
    5 Atu4543 LysR family transcriptional regulator 0.96 0.50
    6 Atu4542 beta-ketoadipate enol-lactone hydrolase 0.98 0.49
    7 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase 0.56 0.49
    8 Atu4529 hypothetical protein 0.59 0.49
    9 Atu4536 amino acid ABC transporter permease no 0.40
    10 Atu4533 amino acid ABC transporter ATPase/permease no 0.39
    11 Atu4541 carboxymuconolactone decarboxylase 0.96 0.38
    12 Atu4535 amino acid ABC transporter substrate-binding protein no 0.37
    13 Atu4531 3-dehydroquinate dehydratase 0.61 0.35
    14 Atu4532 shikimate 5-dehydrogenase 0.65 0.34
    15 Atu4534 amino acid ABC transporter substrate-binding protein no 0.33
    16 Atu4537 amino acid ABC transporter permease no 0.33
    17 Atu4546 IclR family transcriptional regulator 0.96 0.31
    18 Atu8117 hypothetical protein no 0.31
    19 Atu4703 hypothetical protein no 0.31
    20 Atu2672 hypothetical protein no 0.29

    Or look for negative cofitness